ARGenus reference databases (ARG + flanking, 1kbp & 5kbp)

Reference databases for ARGenus (https://github.com/necoli1822/ARGenus): PanRes ARG sequences, PanRes-based flanking databases at 1000bp (flanking_1kbp.fdb) and 5000bp (flanking_5kbp.fdb) for genus/species classification, plus plasmid_contigs.txt (replicon Context) and contig_species.tsv (species axis). See the GitHub README for usage. Derived from the PanRes v1.0.0 resistance-gene collection (https://doi.org/10.5281/zenodo.8055116); therefore distributed under CC BY-NC 4.0 (non-commercial use only), separate from the MIT-licensed ARGenus code. Please cite: Martiny H-M, et al. ARGprofiler—a pipeline for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets. Bioinformatics 40(3):btae086 (2024). https://doi.org/10.1093/bioinformatics/btae086. PanRes aggregates ResFinder, ResFinderFG, CARD, MEGARes, NCBI AMRFinderPlus, ARG-ANNOT and BacMet. See the included NOTICE file for full attribution.