Data from: Keeping things local: subpopulation Nb and Ne in a stream network with partial barriers to fish migration
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For organisms with overlapping generations that occur in metapopulations, uncertainty remains regarding the spatio-temporal scale of inference of estimates of the effective number of breeders (N^b)and whether these estimates can be used to predict generational Ne. We conducted a series of tests of the spatio-temporal scale of inference of estimates of Nb in nine consecutive cohorts within a long-term study of brook trout (Salvelinus fontinalis). We also tested a recently developed approach to estimate generational Ne from N^b and compared this to an alternative approach for estimating N^e that also accounts for age structure. Multiple lines of evidence were consistent with N^b corresponding to the local (subpopulation) spatial scale and the cohort-specific temporal scale. We found that at least four consecutive cohort-specific estimates of N^b were necessary to obtain reliable estimates of harmonic mean N^b for a subpopulation. Generational N^e derived from cohort-specific N^b were within 7 - 50% of an alternative approach to obtain, N^e suggesting some population-specificity for concordance between approaches. Our results regarding the spatio-temporal scale of inference for Nb should apply broadly to many taxa that exhibit overlapping generations and metapopulation structure and point to promising avenues for using cohort-specific N^b for local-scale genetic monitoring.
对于存在重叠世代且具有集合种群(metapopulations)结构的生物,有效繁殖个体数(effective number of breeders,N^b)估计值的推断时空尺度,以及此类估计值能否用于预测世代有效种群大小(generational N^e),仍存在不确定性。我们针对溪鳟(Salvelinus fontinalis)的长期研究中的9个连续同龄群(cohort),开展了一系列关于N^b估计值推断时空尺度的检验。同时,我们还测试了一种新近开发的、基于N^b估计世代有效种群大小的方法,并将其与另一种同时考虑年龄结构(age structure)的N^e估计方法进行了比较。多项证据均表明,N^b对应局域亚种群(subpopulation)空间尺度与同龄群特异性的时间尺度。我们发现,若要获得某亚种群的N^b调和均值(harmonic mean)估计值,至少需要4个连续的同龄群特异性N^b估计结果。基于同龄群特异性N^b推导得到的世代N^e,与另一种N^e估计方法的结果相差7%至50%,这提示不同种群间的方法一致性存在种群特异性。本研究关于N^b推断时空尺度的结论,可广泛适用于诸多具有重叠世代与集合种群结构的生物类群,并为利用同龄群特异性N^b开展局域尺度遗传监测(genetic monitoring)指明了颇具前景的方向。



