Additional file 6: of Global analysis of primary mesenchyme cell cis-regulatory modules by chromatin accessibility profiling

Table S5.ATAC-seq peaks significantly differentially enriched (DESSeq2 nominal p < 0.2) in isolated PMCs compared to non-PMC cells. Column 1: ATAC-seq Peak Name: Peak number, obtained from ATAC-seq RPS peak names. Column 2: Scaffold: S. purpuratus genome version 3.1 scaffold containing the peak. Column 3: Start: Start coordinate of the peak. Column 4: End: End coordinate of the peak. Column 5: baseMean: DESeq2 mean of normalized counts for all samples. Column 6: log2FoldChange: the DESeq log2 fold change of the treatment mean over the control mean. Column 7: lfcSE: log 2 fold change standard error. Column 8: stat: Wald statistic comparing treatment condition to control. Column 9: pvalue: Wald test p value. (XLSX 216 kb)