Short-term acidification promotes diverse iron acquisition and conservation mechanisms in upwelling-associated phytoplankton
收藏NIAID Data Ecosystem2026-05-01 收录
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https://figshare.com/articles/dataset/Short-term_acidification_promotes_diverse_iron_acquisition_and_conservation_mechanisms_in_upwelling-associated_phytoplankton/22589218
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Supplementary Figure 17: Maximum likelihood phylogenetic tree as inferred from iron permease (FTR1) amino acid sequences (255 taxa/241 positions) under the LG+C40+F+R8 model as implemented in IQTree 2. The scale bar represents 0.1 amino acid substitutions per position. Branch colours and labels correspond to different taxonomic groups. Numbers above branches indicate ultra-fast Maximum-likelihood bootstrap support.
Supplementary Figure 18: Maximum likelihood phylogenetic tree as inferred from CDF-family amino acid sequences (542 taxa/309 positions) under the LG+F+R10 model as implemented in IQTree 2. The scale bar represents 0.1 amino acid substitutions per position. Branch colours and labels correspond to different taxonomic groups. Numbers above branches indicate Maximum likelihood ultra-fast bootstrap support.
Supplementary Figure 19: Maximum likelhood phylogenetic tree as inferred from FecCD-like sequences (58 taxa/250 positions) under the LG+C20+F+R5 model as implemented in IQTree 2. The scale bar represents 0.1 amino acid substitutions per position. Branch colours and labels correspond to different taxonomic groups. Numbers above branches indicate Maximum likelihood ultra-fast bootstrap support.
Supplementary Figure 20: Maximum likelihood phylogenetic tree as inferred from SLC49 -family amino acid sequences (374 taxa/386 positions) under the LG+C40+F+R10 model as implemented in IQTree 2. The scale bar represents 0.1 amino acid substitutions per position. Branch colours and labels correspond to different taxonomic groups. Numbers above branches indicate ultra-fast Maximum-likelihood bootstrap support.
Supplementary Figure 24: Maximum likelihood phylogenetic tree as inferred from mitoNEET amino acid sequences (279 taxa/102 positions) under the LG+C40+F+R7 model as implemented in IQTree 2. The scale bar represents 1 amino acid substitutions per position. Branch colours and labels correspond to different taxonomic groups. Numbers above branches indicate ultra-fast Maximum-likelihood bootstrap support.
Dataset 1. 16S ASV taxonomic assignments and raw abundances for each sample.
Dataset 2. 18S ASV taxonomic assignments and raw abundances for each sample.
创建时间：
2023-11-09
