In this study we compared methods for quantifying taxonomic composition of microbial communities. The compared methods included metagenomics, 16S rRNA amplicon sequencing and metaproteomics. This ENA
a Organisms are not included in the Verigene Test identification panelThe identities of bacteria in cultures with discordant results reported by culture-based method and the Verigene Test.
The arrays were hybridized against cDNAs labeled during reverse transcription reactions, which were obtained from bacteria grown under two different conditions (liquid XDM2 and liquid BCYE). Overall d
The tested media are the computationally-defined minimal medium (iMinMed), the LB, and the SNM. Computational growth rates are given in mmol/(gDW · h), while in vitro rates in h−1. Doubling times are