Replication Code: Detection and clearance of type-specific and phylogenetically related genital human papillomavirus infections in young women in new heterosexual relationships

This replication package includes documentation to reproduce the results of the study \"Detection and clearance of type-specific and phylogenetically related genital human papillomavirus infections in young women in new heterosexual relationships\" by Andrew W. Arthur, Mariam El-Zein, Ann N. Burchell, Pierre-Paul Tellier, Francois Coutlée and Eduardo L. Franco. The included files generate 4 main tables, 2 main figures, 5 supplemental tables, and 7 supplemental figures. All analyses were conducted using data from the HPV Infection and Transmission among Couples through Heterosexual activity (HITCH) cohort study. Participant consent forms specified that data would be published in aggregate form and that individual-level data would only be available to study investigators. To access individual-level data, please contact Eduardo Franco at [e-mail].