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Data for "The evolution of gene functional repertoire in Amorphea: Divergent strategies across Amoebozoa, Fungi, and Metazoa"

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DataCite Commons2025-06-12 更新2025-05-07 收录
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https://figshare.com/articles/dataset/Data_for_The_evolution_of_gene_functional_repertoire_in_Amorphea_Divergent_strategies_across_Amoebozoa_Fungi_and_Metazoa_/28741229/4
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Collection of data used in the study:<b><i>“The evolution of gene functional repertoire in Amorphea: Divergent strategies across Amoebozoa, Fungi, and Metazoa”</i></b>Find related code and input files descriptions in GitHub (future release)<b>Supplementary video and file information:</b><b>Supplementary Video 1. BEAP0066, encystation.</b> Video accelerated to x300 normal speed. Total time elapsed = 4.7 h.<b>Supplementary Video 2. BEAP0066, intermediate stage to encystation.</b> Video accelerated to x150 normal speed. Total time elapsed = 1.2 h.<b>Supplementary Video 3. BEAP0066, cell to cell communication.</b> Video accelerated to x150 normal speed. Total time elapsed = 1.6 h.<b>Supplementary Video 4. BEAP0066, double-amoeba.</b> Video accelerated to x150 normal speed. Total time elapsed = 5.8 h.<b>Supplementary Video 5. BEAP0066, rings in solid medium.</b> Video accelerated to x300 normal speed. Total time elapsed = 2.9 h.<b>Supplementary File 1. </b>Newick tree for Figure 1.<b>Supplementary File 2. </b>Species used in the project with source and name abbreviation..<b>Supplementary File 3. </b>Genomes used for transcriptome decontamination.<b>Supplementary File 4. </b>Differentially expressed Pfam clans per taxonomic group.<b>Supplementary File 5. </b>Newick tree for Supplementary Figure 1.<b>BEAP0066_tsa_transcriptome.fasta. </b><i>Apostamoeba explorator</i> transcriptome.<b>BEAP0079_tsa_transcriptome.fasta.</b> <i>Vannella septentrionalis</i> transcriptome.<b>BEAP0066_proteome.fasta. </b><i>Apostamoeba explorator</i> proteome.<b>BEAP0079_proteome.</b> <i>Vannella septentrionalis</i> proteome.
提供机构:
figshare
创建时间:
2025-05-06
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