HyAsP NCBI RefSeq database

Figshare2019-04-16 更新2026-04-29 收录

质粒检测

质粒分箱

数据链接：

https://figshare.com/articles/dataset/HyAsP_NCBI_RefSeq_database/8001827 数据链接链接失效反馈

官方服务：

资源简介：

NCBI plasmids database for the HyAsP plasmid detetcion and binning tool.

创建时间：

2019-04-16

Supplementary Dataset 8. Screening results using ABRicate and PlasmidFinder 2.1 database (460 sequences, 2020-May-13 last access) and mlplasmids results to predict their chromosomal or plasmid probability location.

基因组分析

质粒检测

Supplementary Dataset 8. Screening results using ABRicate and PlasmidFinder 2.1 database (460 sequences, 2020-May-13 last access) and mlplasmids results to predict their chromosomal o

DataCite Commons2023-05-16 更新280

Additional file 3 of PlasForest: a homology-based random forest classifier for plasmid detection in genomic datasets

基因组分析

质粒检测

Additional file 3. List S2: Identifiers of contigs used to create the METAGENOME dataset.

DataCite Commons2021-06-27 更新90

PlasmidSeeker database k=20

质粒检测

细菌耐药性

PlasmidSeeker database containing 8,514 plasmids downloaded from RefSeq. K-mer length used is 20 bp.

Figshare2017-10-13 更新60

Additional file 6 of PlasForest: a homology-based random forest classifier for plasmid detection in genomic datasets

基因组数据分析

质粒检测

Additional file 6. Table S2B: Identifiers and positions of contigs used to create the testing set.

DataCite Commons2021-06-27 更新110

Additional file 4 of PlasForest: a homology-based random forest classifier for plasmid detection in genomic datasets

基因组分析

质粒检测

Additional file 4. Table S1: Empirical distribution of contig sizes used to cut complete genomes into contigs.

DataCite Commons2021-06-27 更新70

HyAsP NCBI RefSeq database

资源简介：

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