Additional file 2 of Limited effects of long-term daily cranberry consumption on the gut microbiome in a placebo-controlled study of women with recurrent urinary tract infections

Additional file 2. HUMAnN2 pathway and gene family results. Pathway results are in the first tab, while gene family results are in the second tab. Only gene families with unadjusted p < 0.05 are included for brevity. Column B: the average abundance (in counts per million [cpm]) for the cranberry group at week 0; Column C: the average abundance (in cpm) for the cranberry group at week 24; Column D: the average abundance for the placebo group at week 0; Column E: the average abundance for the placebo group at week 24; Column F: the log2 ratio of the fold-change over 24 weeks in the cranberry group to the fold-change over 24 weeks in the placebo group, where a positive value indicates a pathway/gene family increased after 24 weeks in the cranberry group relative to the placebo group; Column G: the p-value of the Wilcoxon rank sum test comparing the fold-changes after 24 weeks between cranberry and placebo group individuals; Column H: the Benjamini-Hochberg adjusted p-value (see Materials and Methods).