Sample size effect on genetic patterns of Patella ferruginea
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资源简介:
Microsatellite_data.csv: dataset containing the genotypes of the 131 individuals of Patella ferruginea retained for the data analysis. First column shows sample IDs, second sampling site and from third on genotypes at eight microsatellite loci are shown <br> POWSIM.IN1: An example of a input file used to run simulations in POWSIM. Samples of size =50 are drwaun from 14 populations of Ne = 1000 after 5 generations of genetic drift <br> tavinput.txt: input file used for carrying out bottleneck simulations in BOTTLESIM software. <br> Random_subsampling_input_data.zip: The archive contains the ten input files in Genepop format used to carry out random sub-sampling and rarefaction curves. Each file in the archive was built by randomly choosing a simulated population from each output file of BOTTLESIM simulations <br> Bottlesim_simpops.zip: the archive contains three files, each of which stores 1000 simulated populations in Genepop format. The three files are the outputs of three distinct simulations carried out using BOTTLESIM software <br> SpotG_Simulation_Results.zip: the archive contains The archive contains the files summarizing the results of scenarios simulated using SpotG sampling online tool. The excel file summarizes the power of detecting genetic divergence across the simulated scenarios <br> R Scripts.zip: The archive contains the R-scripts and the input files necessary to run the analyses and plotting figures 2, 3, 4, S1 ans S2
提供机构:
Mura, Laura; Cossu, Piero; Luca Dedola, Gian; Casu, Marco; Scarpa, Fabio; Fois, Nicola; Sanna, Daria; Lai, Tiziana; Azzena, Ilenia
创建时间:
2022-10-11



