Shotgun Metagenomics Reveals Antibiotic Resistome Dynamics and Metabolic Specialization in Fungal-Dominated Microbiomes (<i>Raw Data</i>)

Six samples from two distinct groups (HFJ and QFJ) were subjected to Illumina-based shotgun sequencing, followed by rigorous quality control, taxonomic classification, KEGG-based functional annotation, and ARG identification via the CARD database. Comparative analysis revealed stark contrasts between the two groups.