Relate input files

This repository contains files required to run Relate on human data. Ancestral genome Genome mask Recombination map for genome builds hg37 and hg38. These were originally downloaded from hg37:genome mask: https://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/supporting/accessible_genome_masks/ancestral genome: https://ftp.1000genomes.ebi.ac.uk/vol1/ftp/phase1/analysis_results/supporting/ancestral_alignments/recombination map: https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.html hg38:genome mask: https://www.internationalgenome.org/announcements/genome-accessibility-masks/ancestral genome: ftp://ftp.ensembl.org/pub/release-86/fasta/ancestral_alleles/recombination map: https://bochet.gcc.biostat.washington.edu/beagle/genetic_maps/ and converted with R script provided We also provide generic human-wide coalescence rates inferred on the 1000G dataset and SGDP dataset that can be used as priors in Relate.