Underlying data for "A deep mutational scanning platform to characterize the fitness landscape of anti-CRISPR proteins"
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https://zenodo.org/record/5221559
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资源简介:
Underlying data for the manuscript "A deep mutational scanning platform to characterize the fitness landscape of anti-CRISPR proteins".
Contains FACS and NGS read data for the deep mutational scanning experiments carried out on the anti-CRISPR proteins AcrIIA4 and AcrIIA5.
The included tar.gz archive has the following directory structure:
fractions_a4/rep_1, rep_2 and rep_3: contains .fastq.gz files for 3 biological replicates of the 4 fractions sequenced for deep mutational scanning analysis of AcrIIA4
fractions_a5/rep_1, rep_2 and rep_3: contains .fastq.gz files for 3 biological replicates of the 4 fractions sequenced for deep mutational scanning analysis of AcrIIA5
library_a4/: contains .fastq.gz files for 2 replicates of the initial AcrIIA4 library
library_a5/: contains .fastq.gz files for 2 replicates of the inital AcrIIA5 library
count_matrices/: contains CSV-format count matrices with the number of reads per single-amino-acid variant for both sequenced fractions and the initial library
facs/ : contains .fcs files for the set of measured benchmark single mutants of AcrIIA4 and AcrIIA5, which were used for model training.
创建时间:
2024-08-26



