MOESM4 of Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass

Additional file 4. Enzyme activity abbreviations and transcriptome dataset tables. Table with enzyme activity, their abbreviations and their predicted target substrate used in this study. The same color scheme for target substrates was used in the main text. A gene to be assigned as expressed more on a substrate (CS or SBH) requires a foldchange > 2.5, p ≤ 0.05 and at least 18 FPKM of expression in at least one condition. Genes with expression < 18 FPKM in each condition were excluded from subsequent analysis, because they were considered to be too poorly expressed.