Translation rates and 3' ends of *S. cerevisiae* genes
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This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
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2019-05-15
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Additional file 7: of A global characterization of the translational and transcriptional programs induced by methionine restriction through ribosome profiling and RNA-seq
Translational efficiency changes under Methionine Restriction and the codon frequency of Lysine(K), Glutamine(Q), Glutamic acid(E) and Methionine(M). This file shows the translational efficiency chang
NIAID Data Ecosystem70
Effects of translation in genes with significant TE.
Numbers shown in this table are based on a Bonferroni-corrected significance threshold. Effects of translation in genes with significant TE.
NIAID Data Ecosystem30
H. volcanii genes with differential translational efficiencies between the HVO_2242 deletion mutant and the wild-type * .
*All genes are tabulated which have a translation efficiency of mutant/wt of ≥2, if they have a more than twofold higher efficiency in the mutant, or ≤0.5, if they have a more than twofold lower effic
NIAID Data Ecosystem20
Transcriptome-wide profiling of translation efficiency using mRNA-seq and Ribo-seq in ER stress-induced NIH3T3 cells
We report systematical profiling of translation efficiency in stress conditions of NIH3T3 cells. In this study, we pharmacologically induced ER stress by treatment of thapsigargin (THAP). Ribo-seq and
NIAID Data Ecosystem50
Transcriptome and ribosome profiling of XRN1-null HEK293T human cell line generated by CRISPR/Cas9 gene editing. Transcriptome and ribosome profiling of XRN1-null HEK293T human cell line generated by CRISPR/Cas9 gene editing
XRN1 is the major cytoplasmic exoribonuclease in eukaryotes, which degrades deadenylated and decapped mRNAs in the last step of the 5′–3′ mRNA decay pathway. Metazoan XRN1 interacts with decapping fac
NIAID Data Ecosystem30
