Additional file 7: of Streamlined computational pipeline for genetic background characterization of genetically engineered mice based on next generation sequencing data

Table S1. DEGs between Sall2 WT and Sall2 KO (FDR < 0.05). Ang, one of the most downregulated genes in the Sall2 KO line is depicted in red. Table S2. List of GO terms obtained with InnateDB from DEGs from Table S1. Table S3. Overlap between the RNA-Seq study and a Microarray Study of Sall2 induction in ESC. Table S4. List of the GO terms obtained with InnateDB from the cross-validated list in Table S3. (XLSX 86 kb)