Additional file 1 of DNA methylation and transcriptomic features are preserved throughout disease recurrence and chemoresistance in high grade serous ovarian cancers

Additional file 1: Supplementary Table 1. Clinical features of the cohort. Supplementary Table 2. PostQC sample information. Supplementary Table 3. PMD genome coverage per sample. Supplementary Table 4. PMDs common to ovarian cancer (ovcaPMDs). Supplementary Table 5. Enriched pathways for genes in PMDs. Supplementary Table 6. DMRs from Primary vs Recurrent. Negative values indicate regions hypermethylated in recurrent samples. Supplementary Table 7. DEGs from Primary vs Recurrent. Supplementary Table 8. Genes near Primary vs Recurrent DMRs intersecting DEGs. Supplementary Table 9. DMRs from BC vs NC. Supplementary Table 10. DMRs from BC vs NC (hg19) that overlap 450k probes within 300bp. Supplementary Table 11. DEGs from BC vs NC. Supplementary Table 12. Genes near BC vs NC DMRs intersecting DEGs