Training Data - Peptide-Binding Domain-Peptide Interactions

Data used to train domain-peptide interactions.
Data FormatEach file describes a specific class of domains. The format for these files are csv files with five columns:
Domain UniProt ID,Domain Sequence,Peptidic Sequence,Bound
Data are de-duplicated (i.e. duplicate interactions are reduced to one) and de-conflicted (i.e. conflicting interactions are removed).

Reference:Cunningham JM, Koytiger G, Sorger PK, AlQuraishi M. "Biophysical
prediction of protein-peptide interactions and signaling networks using
machine learning." Nature Methods (2020).