Additional file 1 of DEPTH2: an mRNA-based algorithm to evaluate intratumor heterogeneity without reference to normal controls

Additional file 1: Table S1. A summary of the datasets used in this study. Table S2. The marker or pathway genes of immune signatures, stemness, and pathways. Table S3. Proteins with significant expression correlations with DEPTH2 scores in at least 5 cancer types. Table S4. Spearman correlations between DEPTH2 score and drug sensitivity (IC50 values) of cancer cell lines to 265 compounds. Table S5. Correlations between ITH scores inferred by six different algorithms within individual cancer types.