five

Candidate iron transporter genes selected from RNAseq data.

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https://figshare.com/articles/dataset/Candidate_iron_transporter_genes_selected_from_RNAseq_data_/14384079
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GeneID: VectorBase gene ID. Log2FC: log2 fold change between indicated comparison groups. in/ex: predicted iron transporting function; in: importer, ex: exporter. Cell line: cell line used for dual-luciferase reporter assay; AAEL013277 was used for both cell lines as the expression was high in both cell lines. Normalized count: normalized CPM (counts per million) for the two cell lines. There was only one dsRNA available for AAEL014972 and AAEL020524 (red fonts) due to high identity between these genes. AAEL008624 and AAEL012698 (grey-shaded) could not be analyzed downstream due to failure of synthesizing dsRNA. Genes in bold fonts are present in both the candidate tables from AaegL3 and AaegL5 assemblies. TMD: number of predicted transmembrane domains. Blue fonts in Log2FC indicates values lower than threshold in AaegL5 mapping, but higher in AaegL3 mapping. Superfamily/Domain: Predicted superfamily/domain by blastp. SLC: solute carrier. TMEM: transmembrane protein. MFS: major facilitator superfamily. ABC: ATP binding cassette. CLC: chloride channel. DUF: domain of unknown function.
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2021-04-07
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