Doctoral thesis-Mengqi Wang-Chapter 5

<strong>Table S1</strong> Read mapping statistics of whole-genome bisulfite sequencing data of six cows <strong>Table S2</strong> The list of differentially methylated cytosines (DMCs) in the context of CpG, CHG and CHH <strong>Table S3</strong> The number of DMCs in CpG context? in different genetic regions <strong>Table S4 </strong>The list of DMRs and annotation <strong>Table S5</strong> The list of genes harboring DMCs or overlapping with DMRs <strong>Table S6</strong> Functional enrichment of genes harboring at least 15 DMCs <strong>Table S7</strong> The list of differentially methylated haplotype blocks (dMHBs) <strong>Table S8</strong> The list of differentially expressed (DE) genes and their functional enrichment <strong>Table S9</strong> The correlation between DNA methylation and gene expression at the scope of whole genome and list of differentially methylated and expressed genes (MetGDE genes) <strong>Table S10</strong> The results of functional enrichment differentially methylated and expressed genes (MetGDE genes) <strong>Table S11</strong> The cluster of functional annotations enriched by differential methylated and expressed genes (MetGDE genes) <strong>Table S12</strong> The correlation between discriminant candidate biomarkers