EGFP positive cell counts in the 3D skeleton dataset generated with KNOSSOS.

The LSFM recorded dataset of the virus injected mouse brain shown in Fig 5 was analyzed in KNOSSOS after manual classification of the EGFP positive cells using the Allen Mouse Brain Atlas and Brain Explorer2 software. The number of EGFP positive cells and their distribution in different brain regions are given for the virus injected ipsilateral and the contralateral site of the brain. EGFP positive cells in the ipsilateral site, outside the injection region, and EGFP positive cells from the contralateral site are monosynaptically connected to RABV∆G-EGFP producing neurons in the ipsilateral hemisphere. Irrelevant cells were left empty. EGFP positive cell counts in the 3D skeleton dataset generated with KNOSSOS.