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Identify specific binding motif
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创建时间：
2018-06-11
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Additional file 2: of TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets
Table S2. Details of motif occurrence comparison between web-based motif discovery software. The highest scoring motifs discovered in DREME, MEME, RSAT peak-motifs, and TrawlerWeb and their correspond
Mendeley Data2024-06-29 更新170
Number of KEGG pathways (total and with motifs).
(a): Total number of KEGG pathways in each of the seven organisms under study; (b): Number of KEGG pathways for which at least one significant motif was found (hyper-geometric p-value<3e-9, see Materi
NIAID Data Ecosystem40
Additional file 3 of Evaluating tools for transcription factor binding site prediction
Motif Discovery Tool Performance. Complete results for individual PWMs generated using different motif discovery tools and scanned against PAZAR-E data using the FIMO motif scanning tool. (XLS 14 kb)
DataCite Commons2020-07-14 更新40
BPPalign: Aligning RNA secondary structure probabilities to discover new motifs
This tool provides basic scripts to run the partition executable RNAstructure on hundreds of homolog sequences from RFAM, and to then visualize the results by averaging across these matrices. Examples
simtk.org2011-10-21 更新60
Classification results on the H1-hESC test data set.
We display the sensitivity (for specificity of 99%) on the independent test data set . Here we pick the optimal model from the cross validation experiment (green) and compare it with the PWM model (bl
Figshare2016-02-23 更新40
