Pervasive RNA Binding Protein Enrichment on TAD Boundaries Regulates TAD Organization [Hi-C]

NIAID Data Ecosystem2026-05-02 收录

TAD组织调控

RNA结合蛋白功能

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https://www.ncbi.nlm.nih.gov/sra/SRP461653 数据链接链接失效反馈

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Hi-C in RBFox2 knockdown K562 and RBFox2 knockout C2C12 cells, Hi-C in ActD, RNase, and RNase inhibitor (RIN) treated C2C12 cells. Overall design: Hi-C

创建时间：

2025-02-13

Supporting data for “Roles of RNA-binding proteins in thermogenesis”

RNA结合蛋白功能

棕色脂肪产热

This study is to investigate the dynamics and functional properties of RNA-binding proteins in brown adipose tissue during cold exposure. All wild type mice were purchased from Laboratory Animal Unit

DataCite Commons2022-01-05 更新80

Additional file 6 of Elevated expression of the RNA-binding protein IGF2BP1 enhances the mRNA stability of INHBA to promote the invasion and migration of esophageal squamous cancer cells

癌症分子机制

RNA结合蛋白功能

Additional file 6: Table S11-13. Table S11. Potential interactive proteins of IGF2BP1 identified using MS. Table S12. Proteins identified using MS that regulate RNA. Table S13. Candidate interacting p

Figshare2024-02-28 更新50

The RNA-binding protein Rumpelstiltskin antagonizes gypsy chromatin insulator function in a tissue-specific manner

染色质绝缘子调控

RNA结合蛋白功能

Chromatin insulators are DNA-protein complexes situated throughout the genome that contribute to higher order organization and demarcation into distinct transcriptional domains. Mounting evidence in

NIAID Data Ecosystem50

Transcriptome of Trypanosoma brucei strain Lister427 MiTat1.2 bloodstream form, wild-type vs ZC3H40 knockdown for 72 hours and CLIP-seq analysis of ZC3H39-GFP and ZC3H40-GFP bound vs unbound transcripts.

锥虫呼吸体调控

RNA结合蛋白功能

Post-transcriptional regulons coordinate the expression of groups of genes in eukaryotic cells, yet relatively few have been characterised. Parasitic trypanosomatids are particularly good models for s

NIAID Data Ecosystem60

RNA-sequencing of PC3M prostate cancer cells depleted of the RNA binding protein HNRNPA2B1

前列腺癌分子机制

RNA结合蛋白功能

RNA binding proteins (RBPs) play important roles in cellular stress responses. Here we investigated the association between HNRNPA2B1, an RBP upregulated in prostate cancer, and expression of genes in

NIAID Data Ecosystem50

Pervasive RNA Binding Protein Enrichment on TAD Boundaries Regulates TAD Organization [Hi-C]

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