Mock community analysis

Figshare2018-09-03 更新2026-04-08 收录

微生物组质量控制

模拟群落验证

数据链接：

https://figshare.com/articles/Mock_community_analysis/7040111/1 数据链接链接失效反馈

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资源简介：

mothur output files from analysis of all samples (not subsampled)<br>used to assess mock community (LW43) as a positive control<br>

创建时间：

2018-09-03

Fish mock community with 41 species from 13 orders

鱼类宏条形码

模拟群落验证

Tissue extracts of 41 North American fish species were obtained from the Ministère des Forêts, de la Faune et des Parcs (Québec). The selected species were chosen to represent a diversity of families

NIAID Data Ecosystem70

Additional file 3: of iMAP: an integrated bioinformatics and visualization pipeline for microbiome data analysis

微生物组质量控制

生物信息学预处理

Preprocessing report generated automatically by the iMAP to provide a summary of quality control of the reads. The iMAP pipeline automatically saved the output in the “reports” folder as “report2_read

NIAID Data Ecosystem70

Additional file 1 of The composition of lung microbiome in lung cancer: a systematic review and meta-analysis

肺癌微生物组

微生物组质量控制

Additional file 1. QIIME Quality Filter Parameters. The parameters used in DADA2 denoising step.

NIAID Data Ecosystem50

Negative control analysis

微生物组质量控制

阴性对照分析

mothur output files and R code for analysis of negative controls (not subsampled, includes digester and liquid effluent samples, does not include mock community) LW56 = negative kit controlLW57 = no-t

NIAID Data Ecosystem70

Biological and technical variation in microbiome studies. Bacterial mock community

微生物组质量控制

测序技术

New technologies in sequencing and bioinformatics have transformed microbiome studies into a powerful tool for medical research. However, small changes in technique or analysis can significantly alter

NIAID Data Ecosystem60

Mock community analysis

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