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Angus Sequence Data: Animal 44883

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agdatacommons.nal.usda.gov2024-10-21 更新2025-03-23 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Angus_Sequence_Data_Animal_44883/24665970/1
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Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.The National Animal Germplasm Program has germplasm for this animal, with the repository number 44883.There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset . In the diagram, the two reads would correspond to read 1 and read 3.Resources in this dataset:Resource Title: Animal 44883 Sequence Data - SCINet.File Name: Web Page, url: https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32139/tar file containing 14 files. The files are: RAPiD-Genomics_F112_CSU_136201_P001_WC02_i5-515_i7-122_S26_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WC02_i5-515_i7-122_S26_L003_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S162_L002_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S162_L002_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S26_L001_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC02-i5-515-i7-122_S26_L001_R2_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WC02-i5-515-i7-122_S26_L003_R1_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WC02-i5-515-i7-122_S26_L003_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L001_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L001_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L002_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC02_i5-515_i7-122_S26_L002_R2_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WC02_i5-515_i7-122_S381_L002_R1_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WC02_i5-515_i7-122_S381_L002_R2_001.fastq.gzSCINet users: The .tar file can be accessed/retrieved with valid SCINet account at this location: /LTS/ADCdatastorage/NAL/published/node32139/44883.tarSee the SCINet File Transfer guide for more information on moving large files: https://scinet.usda.gov/guides/data/datatransferGlobus users: The files can also be accessed through Globus by following this data link. The user will need to log in to Globus in order to retrieve this data. User accounts are free of charge with several options for signing on. Instructions for creating an account are on the login page.

Bos taurus 牛种全基因组序列数据集。数据以 'fastq' 格式存储。国家动物种质资源库收藏有该物种的种质,库藏编号为 44883。每个文件包含两版次,因采用双端测序技术所致。每条数据线包含两个读段(正向读段和反向读段),共计 420 个读段。此信息在收集数据集的示意图中有所体现,图中读段1和读段3分别对应于上述两个读段。本数据集包含以下资源: 资源标题:动物 44883 序列数据 - SCINet。 文件名:网页,网址:https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32139/tar 文件包含 14 个文件。文件列表如下: RAPiD-Genomics_F112_CSU_136201_P001_WC02_i5-515_i7-122_S26_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WC02_i5-515_i7-122_S26_L003_R2_001.fastq.gz ... RAPiD-Genomics_F116_CSU_136201_P001_WC02_i5-515_i7-122_S381_L002_R2_001.fastq.gz SCINet 用户:使用有效的 SCINet 账户可在此位置访问/检索 .tar 文件:/LTS/ADCdatastorage/NAL/published/node32139/44883.tar。有关移动大文件的信息,请参阅 SCINet 文件传输指南:https://scinet.usda.gov/guides/data/datatransfer Globus 用户:用户亦可通过 Globus 访问这些文件,遵循以下数据链接。用户需登录 Globus 以获取此数据。Globus 账户免费,并提供多种登录选项。创建账户的说明位于登录页面。
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