Additional file 9: Table S5. of Genetic analysis of variation in lifespan using a multiparental advanced intercross Drosophila mapping population

Differentially expressed genes in bodies. Table includes all genes surviving a genomewide FDR threshold of 5 % in at least one contrast. The data is taken directly from the “gene_exp.diff” Cuffdiff output file, and simply trimmed to remove data for those genes failing to reach genomewide significance (q < 0.05) in at least one contrast. The “Gene” and “FBgn” columns give information on the gene name, and the “Position” column provides the gene location in release 5 of the D. melanogaster reference genome. The “Sample1” and “Sample2” columns give the names of the two samples being compared, and the “FPKM1” and “FPKM2” columns give the FPKM (Fragments Per Kilobase of exon model per Million mapped fragments) values for each sample. The “FoldChange.Log2” column gives the log2 fold change in expression (Sample2 divided by Sample1). The “TestStat” column gives the test statistic used by Cuffdiff to compute the significance of the observed change in FPKM between samples, the “Pval” column provides the uncorrected p-value of the test statistic, and the “Qval” column provides the Benjamini-Hochberg FDR-adjusted p-value of the test statistic. (TXT 40 kb)