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Supplementary data for Berenguer Millanes et al. 2024

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Figshare2024-08-06 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Supplementary_data_for_Berenguer_Millanes_et_al_2024/26068201/1
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Scripts and raw-data for the manuscript Berenguer Millanes et al. 2024 "The effect of inversion size on the recombination landscape in fission yeast".The raw reads obtained by NanoPore and Illumina sequencing have been deposited at NCBI-SRA under BioProject number PRJNA1126042.Analyses of the long-read data are in folders analysis/01_canu_assemblies and analysis/02_find_breakpointsVariant calling and analysis are described in folder analysis/03_snpcall and analysis/04_variant_analysisThe script to perform simulations and parameter estimates for recombination rates and tetrad survival are given in folder analysis/05_modelThe vcf file used to assess variants was obtained from Jeffares et al. 2015 and is available at this location: https://figshare.com/articles/dataset/SNP_calls_for_all_161_strains_/3978303?file=6217275
提供机构:
Nieuwenhuis, Bart
创建时间:
2024-08-06
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