Complete T2T genome annotation files for soybean cultivar QH34: Gene structure, repeats, and functional annotation

This dataset provides comprehensive annotations for the telomere-to-telomere (T2T) genome assembly of soybean (*Glycine max*) cultivar QH34. It includes: 1. **Gene structure annotation** (`QH34_T2T_Chr.gff3`): - Gene models (CDS, exons, UTRs) predicted using [BRAKER2/Funannotate]. - Format: GFF3 (standard genomic feature format). 2. **Repeat annotation** (`QH34_T2T_Chr.fasta.mod.EDTA.TEanno.gff3`): - Transposable elements (TEs) and repetitive sequences identified by [EDTA/RepeatModeler2+RepeatMasker]. - Format: GFF3 with TE classifications. 3. **Functional annotation** (`func_merge.xls`): **Data generation**: - Genome assembly: PacBio HiFi (101×) + ONT (102×) + Hi-C scaffolding. - Analysis pipelines: [`EDTA` for repeats, `InterProScan` for domains]. **Usage notes**: - Files are compatible with genome browsers (e.g., IGV) and analysis tools (e.g., BEDTools). - For functional annotations, refer to the header row in `func_merge.xls` for field descriptions.