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Trichiurus japonicus isolate:CL-2024 Genome sequencing

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NIAID Data Ecosystem2026-05-02 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP582751
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The genome sequencing project for Trichiurus japonicus (beltfish) utilized highly precise whole-genome shotgun (WGS) methods. This genome was assembled using PacBio, Nanopore long reads, and Illumina HiFi, Hi-C, 10x reads employing various tools, such as HiFiasm, SALSA2, LOCLA, and Canu. The chromosome-level assembled draft genome measures approximately 1.14 GB, is organized into 184 scaffolds, and has an N50 value exceeding 47 MB. A detailed evaluation with BUSCO v5.3.2, using the actinopterygii_odb10 lineage dataset, revealed that 98.6% of the assembly's top matches align with the Actinopterygii taxonomic group.Author information:Dr. Chao-Lun Allen ChenBiodiversity Research Center, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei 11529, TaiwanDr. Chung-Yen Lin, Wei-Hsuan Chuang, Ping-Heng HsiehInstitute of Information Science, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei 11529, Taiwan Dr. Shu-Hwa Chen TMU Research Center of Cancer Translational Medicine, Taipei Medical University, Taipei, TAIWAN
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2025-05-07
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