Example wiki content for RDFIO demonstrator I: OrphaNet data imported into Semantic MediaWiki
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https://figshare.com/articles/dataset/Example_wiki_content_for_RDFIO_demonstrator_I_OrphaNet_data_imported_into_Semantic_MediaWiki/5379856
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This file is a MediaWiki XML dump of the wiki content generated for Demonstrator I in the RDFIO article [1], importing the open part of the OrphaNet dataset [2], converted to RDF in the Bio2RDF project [3].<br>They are exported using a command like:<br><br>cd WIKIDIR<br>php maintenance/dumpBackup.php --current | gzip -c > FILENAME.xml.gz<br><br>They can be imported into a Semantic MediaWiki enabled MediaWiki wiki, using the command:<br><br>cd WIKIDIR<br>php maintenance/importDump.php FILENAME.xml.gz<br><br><b>License information</b><br><br>See this page for information and links to the OrphaNet data used:<br>http://download.bio2rdf.org/release/3/orphanet/orphanet.html<br><br><b>References</b><br><br>[1] Lampa S, Willighagen E, Kohonen P, King A, Vrandečić D, Grafström R, Spjuth O. RDFIO: Extending Semantic MediaWiki for interoperable biomedical data management. 2017;8(35):1-13. doi:10.1186/s13326-017-0136-y<br>http://dx.doi.org/10.1186/s13326-017-0136-y<br><br>[2] Rath A, Olry A, Dhombres F, Brandt MM, Urbero B, Ayme S. Representation of rare diseases in health information systems: The orphanet approach to serve a wide range of end users. HumMutation. 2012;33(5):803–8. doi:10.1002/humu.22078.<br>http://dx.doi.org/10.1002/humu.22078<br><br>[3] Belleau F, NolinMA, Tourigny N, Rigault P, Morissette J. Bio2rdf: Towards amashup to build bioinformatics knowledge systems. J Biomed Inform. 2008;41(5):706–16. doi: 10.1016/j.jbi.2008.03.004. Semantic Mashup of Biomedical Data<br>http://dx.doi.org/10.1016/j.jbi.2008.03.004
提供机构:
figshare
创建时间:
2017-09-06



