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Additional file 14 of FixNCut: single-cell genomics through reversible tissue fixation and dissociation

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Additional file 14: Table 13. This table contains the results of gene set enrichment analysis (GSEA) for fixed versus fresh human colon biopsies comparison by cell population. The test was performed with the fgsea package using multiple gene sets from MSigDB. Gene sets were included only if they contained between 10-300 genes, and obtained results were considered with a FDR adjusted p-value < 0.05, only if more than 5 genes were overlapping with the gene set and represented more than 15% of the gene set (see Methods).
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2024-08-15
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