Spatial2GWAS: a database for linking spatial transcriptomic regions with GWAS traits
收藏资源简介:
Filename_scdrs_significant_group_table.tar.gz: the spatial region-GWAS trait association analysis results using the scDRS method Filename_gene_associated_table.tar.gz: genes co-expressed with GWAS trait-associated genes identified using Pearson's correlation analysis Filename_drug_target.tar.gz: overlap of genes co-expressed with GWAS trait-associated genes and drug targets in DGIdb 5.0 Filename_spot_DEGs_table.tar.gz: differentially expressed genes between trait-related and unrelated spots/bins Filename_region_DEGs_table.tar.gz: differentially expressed genes between trait-related and unrelated spatial regions Filename_spot_GO_table.tar.gz: enriched GO terms based on differentially expressed genes between trait-related and unrelated spots/bins Filename_region_GO_table.tar.gz: enriched GO terms based on differentially expressed genes between trait-related and unrelated spatial regions Filename_spot_KEGG_table.tar.gz: enriched KEGG pathways based on differentially expressed genes between trait-related and unrelated spots/bins Filename_region_KEGG_table.tar.gz: enriched KEGG pathways based on differentially expressed genes between trait-related and unrelated spatial regions analysis code.zip: scripts for scDRS pipeline and downstream analysis



