tmRNA database
收藏DataCite Commons2025-06-01 更新2025-05-07 收录
下载链接：
https://figshare.com/articles/dataset/tmRNA_database/28430909/1
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资源简介：
Database of unique tmRNA sequences [accompanying Nawrocki, Petrov, Williams, 2025. Expansion of the tmRNA sequence database and new tools for search and visualization. NAR Genom Bioinformatics]. Columns:Unique IDGene formGene segments and their positions on the segmentsEncoded proteolytic tag sequenceGenetic code used for tag translation (https://en.wikipedia.org/wiki/List_of_genetic_codes)Comma-separated scores from Aragorn v1.2.40 and the CMs alpha_tmRNA, beta_tmRNA, cyano_tmRNA, permuted_tmRNA, mt-tmRNA, tmRNA, tmRNA_standard, tmRNA_intronTaxonomy (for prokaryotes, from GTDB release 214)Gene sequence with lower case marking tag CDS, intervening sequence (IVS), and bases corresponding to CCA tailCount of known instances of this sequenceKnown instances ([assembly ID for prokaryotes/]GenBank accession/coordinates)Search phase (see Methods)Note
提供机构：
figshare
创建时间：
2025-02-17
