The Influence of Transcript Assembly on Proteogenomics Discovery of Microproteins

Supplementary dataset for "The Influence of Transcript Assembly on Proteogenomics Discovery of Microproteins" This dataset contains paired RNA-Seq reads simulated with flux-simulator in fastq.gz format. In addition, the flux-simulator parameter file is included as hg19.par. These are located in the flux_simulator folder. The reads were generated from the human hg19 genome in order to test transcript assembly. The hg19 refseq annotation was used to define genes (see hg19_refseq.gtf). The hg19 chromosome sequence files (e.g. chr1.fa) are also included for completeness. These are located in the hg19 folder.《转录组组装对微蛋白蛋白质基因组学发现的影响》补充数据集。本数据集包含使用通量模拟器（flux-simulator）模拟生成的成对RNA-Seq读段，格式为fastq.gz。此外，数据集还附带该通量模拟器的参数文件hg19.par，上述文件均存放于flux_simulator文件夹中。本次生成的读段源自人类hg19基因组，用于测试转录组组装性能。实验采用hg19 RefSeq注释信息定义基因（详见hg19_refseq.gtf文件）。为确保数据集完整性，本数据集还包含hg19染色体序列文件（例如chr1.fa），相关文件存放于hg19文件夹中。