Interproscan annotation
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Annotation list
for Calanus finmarchicus reference transcriptome using
InterProScan4.
Contigs were processed with InterProScan4 to scan
InterProScan signatures. A GO was assigned to each contig with an
InterProScan hit containing a GO annotation.
Interprot_annot_206K.tsv
is the annotation list for
Calanus finmarchicus
reference transcriptome using InterProScan4
(a GO annotation was attributed to
65,924 contigs out of the 206,012).
Interprot_annot_206K.gff3
is the annotation list for the
76,550 contigs expressed with more than 1 CPM in the RNA sequencing
Bioproject PRJNA628886 using InterProScan4 (a
GO annotation was attributed to 33,057 contigs out of the 76,550).
4InterProScan: version 5.29-68.0, --goterms -t n -dp -f
TSV, gff3 parameters.
Ref:
Jones, P. et al. InterProScan 5: genome-scale protein function
classification. Bioinformatics 30, 1236–1240 (2014).
Related to bioproject: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA628886
创建时间：
2020-10-29
