Coverage, specificity, and reproducibility of unmodified 20mer arrays.

1True positive/false negative rates and false positive/true negative rates are expressed in brackets.
2Since these Agilent arrays lacked barcodes for essential genes, estimates of false positives were not possible.
3Correlation coefficients represent an average of all possible pair-wise comparisons within the indicated replicate type. Scatter plots are provided in the Supplementary material (Figures S4, S5, S6).
4Comparison using average of all SUBarrays (n = 6) or Agilent arrays (n = 4).
5These amplifications used highly similar biological replicates with the same dye-labeling scheme; however, by definition these are not technical replicates.
6The lower correlation coefficient reflects the presence of numerous dye-swap artifacts.