Interpopulation variation in growth, CTMax and metabolism among seasonal phenologies of Chinook Salmon

# Interpopulation Variation in growth, CTMax and Metabolism among seasonal phenologies of Chinook Salmon --- There are 4 datasets. One that pertains to growth measurements, one that pertains to CTMax data and the third contains data regarding metabolic performance. These first three were used in the 2022 CJFAS paper. The fourth dataset contains metabolic data for small Winter-run Chinook Salmon (2-3g), these data were gathered on the same cohort of fish as those used in the other datasets. These fish were only acclimated to 11C, whereas fish in the other datasets were acclimated to 11, 16, or 20C. The columns and descriptions for these three datasets are below. Only fish used in the analysis for the CJFAS manuscript are included in this data. This excludes fish that did not recover from the metabolic or CTMax trials or fish from other populations that were measured during the same experimental seasons, which leads to gaps in the individual numbering of trial fish ## Column Specs: CJFAS\_2022\_Dryad\_CTM\_Data.csv SEQ: Numerical number, runs from 1 to the end of the dataset, each row gets its own value FISH_NUM: Unique fish identification number, gaps in sequence are due to fish which did not survive recovery, or data from other populations not included in the publication associated with this dataset. HATCHERY: Hatchery identification for each fish, Coleman: Coleman National Fish Hatchery, Winter-Run: Sacramento River Winter-run from Livingston Stone National Fish hatchery, Feather Fall: Feather Fall-run population from the feather river hatchery, Feather Spring: Spring-run population from the Feather River hatchery ACCLIMATION_TEMPERATURE: Temperature at which each fish was acclimated, 11 16 or 20 TANK_ID Rearing tank identity for each fish. As tanks were reused between years the tank ID code is formatted as TANK_POPULATON_YEAR: Population codes are CO: Coleman, WR: Winter-run, FF: Feather Fall and FS: Feather Spring MASS: Fish mass measured in grams STANDARD_LENGTH: Standard length from snout to start of caudal fin, measured in mm. Fish from the Coleman population were not measured for Standard Length and therefore are NA. FORK_LENGTH: Fork length from snout to fork in caudal fin, measured in mm TOTAL_LENGTH: Total length from snout to furthest extremity of caudal fin, measured in mm CONDITION_FACTOR: Fulton's condition factor calculated using the equation K = mass*100/(FL^3) CTM_CHAMBER: Specific CTM chamber that a fish was trialed in, each CTM chamber was assigned a letter identifier, A,B,C,D,E,F or G CTM_DATE: mm/dd/yy of the CTMax Trial AGE_AT_CTMAX: Age of the fish at the CTMax trial (Days) ## Column Specs: CJFAS\_2022\_Dryad\_Growth\_Data.csv SEQ: Numerical number, runs from 1 to the end fo the dataset, each row gets its own value HATCHERY: Hatchery identification for each fish, Coleman: Coleman National Fish Hatchery, Winter-Run: Sacramento River Winter-run from Livingston Stone National Fish hatchery, Feather Fall: Feather Fall-run population from the feather river hatchery, Feather Spring: SPring-run population from the Feather River hatchery ACCLIMATION_TEMPERATURE: Temperature at which each fish was acclimated, 11 16 or 20 TANK_ID: Tank ID as a concatenation of the specific tank code (e.g., I4, E3, H1) and the hatchery a fish came from DATE: Date that a specific fish was measured (mm/dd/yyyy) DAYS: Days into the growth measurement window, starts at 0 YEAR: Year of the growth measurements (2017, 2018 or 2019) MASS: Fish mass measured in grams STANDARD_LENGTH: Standard length from snout to start of caudal fin, measured in mm. Fish from the Coleman population were not measured for Standard Length and therefore are NA. FORK_LENGTH: Fork length from snout to fork in caudal fin, measured in mm TOTAL_LENGTH: Total length from snout to furthest extremity of caudal fin, measured in mm CONDITION_FACTOR: Fulton's condition factor calculated using the equation K = mass*100/(FL^3) ## Column Specs: CJFAS\_2022\_Dryad\_Metabolic\_Dataset.csv SEQ: Numerical number, runs from 1 to the end fo the dataset, each row gets its own value FISH_ID: Unique fish identification number, gaps in sequence are due to fish which did not survive recovery, or data from other populations not included in the publication associated withthis dataset. AS_EXP: Four aerobic scope trials could be conducted at once, one in each swim tunnel. This value keeps track of which trials were conducted concurrently. HATCHERY:Hatchery identification for each fish, Coleman: Coleman National Fish Hatchery, Winter-Run: Sacramento River Winter-run from Livingston Stone National Fish hatchery, Feather Fall: Feather Fall-run population from the feather river hatchery, Feather Spring: SPring-run population from the Feather River hatchery ACCLIMATION_TEMPERATURE:Temperature at which each fish was acclimated, 11 16 or 20 C TEST_TEMPERATURE: Temperature at which metabolic trials were conducted at. (8, 10, 12, 14, 16, 18, 20, 22, 23, 24,25 26C) TANK_ID:Rearing tank identity for each fish. As tanks were reused between years the tank ID code is formatted as TANK_POPULATON_YEAR. Population codes are CO: Coleman, WR: Winter-run, FF: Feather Fall and FS: Feather Spring TUNNEL_ID: Which of four swim tunnels a fish was trialed in. Trials which share a cardinal direction (East vs. West) were connected via a shared sump system and therefore test temperatures of fish trialed in shared systems were the same. RMR: Routine Metabolic Rate (mgO2/kg/hr) MMR: Maximum Metabolic Rate (mgO2/kg/hr) AS: Aerobic Scope (MMR - RMR; mgO2/kg/hr) MASS: Fish mass measured in grams STANDARD_LENGTH: Standard length from snout to start of caudal fin, measured in mm. Fish from the Coleman population were not measured for Standard Length and therefore are NA. FORK_LENGTH: Fork length from snout to fork in caudal fin, measured in mm TOTAL_LENGTH: Total length from snout to furthest extremity of caudal fin, measured in mm CONDITION_FACTOR: Fulton's condition factor (K) calculated using the equation K = mass*100/(FL^3) AGE_AT_TRIAL: Age of the fish at the CTMax trial (Days) ## Column Specs: NOAA\_Preliminary\_Data\_Winter-Run\_Small.csv FISH_ID: Unique fish identification number, gaps in sequence are due to fish which did not survive recovery, or data from other populations not included in the publication associated withthis dataset.\ HATCHERY: Hatchery identification for each fish, there is only one value, Winter-run.\ ACCLIMATION_TEMPERATURE:Temperature at which each fish was acclimated, 11 16 or 20 C\ TEST_TEMPERATURE: Temperature at which metabolic trials were conducted at. (8, 10, 12, 14, 16, 18, 20, 22, 23, 24,25 26C) MASS: Fish mass measured in grams\ STANDARD_LENGTH: Standard length from snout to start of caudal fin, measured in mm. Fish from the Coleman population were not measured for Standard Length and therefore are NA.\ FORK_LENGTH: Fork length from snout to fork in caudal fin, measured in mm\ TOTAL_LENGTH: Total length from snout to furthest extremity of caudal fin, measured in mm\ AS_NUM: Four aerobic scope trials could be conducted at once, one in each swim tunnel. This value keeps track of which trials were conducted concurrently. RMR_DATE: Date of the RMR trial (m/d/y)\ TUNNEL_ID: Which of two 5l Loligo swim tunnels a fish was trialed in.\ RMR: Routine Metabolic Rate (mgO2/kg/hr)\ MMR: Maximum Metabolic Rate (mgO2/kg/hr)\ AS: Aerobic Scope (MMR - RMR; mgO2/kg/hr) EXP_YEAR: Calendar year when the trial was conducted (only value is 2018) LOCATION: Location of source population (only value is CA)\ LAT: Latitude of source population (only value is 40.7162) LONG: Longitude of source population (only value is -122.425 ELEVATION: Elevation of source population (only value is 179, meters) MIGRATION: Distance of source population from San Fancisco Delta (only value is 307.4, miles)\ AGE_AT_TEST: Age of the fish at the Metabolic trial (Days) ## Sharing/access Information Contact Ken Zillig for questions about this data.