Physical and chemical metadata for microbiological samples from R/V New Horizon cruises GoCAL1, GoCAL2, GoCAL3 in the Guaymas Basin, Gulf of California from 2004-2005 (Guaymas plumes project)
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<p>Physical and chemical metadata (sal, Mn, O2, temp, etc.) for microbiological samples from Guyamas Basin plumes.</p> <p><em>The following publications are associated with this data:</em><br /> Anantharaman, K.A., M.B. Duhaime, J.A. Breier, K. Wendt, B.M. Toner, and G.J. Dick (2014). Sulfur oxidation genes in diverse deep-sea viruses. Science 344: 757-760. doi:<a href=\"http://dx.doi.org/10.1126/science.1252229\" target=\"_blank\">10.1126/science.1252229 </a></p> <p>Li, M., B.M. Toner, B.J. Baker, J.A. Breier, C.S. Sheik, and G.J. Dick (2014). Microbial iron uptake as a mechanism for dispersing iron from deep-sea hydrothermal vents. Nature Communications 5: 3192. doi:<a href=\"http://dx.doi.org/10.1038/ncomms4192\" target=\"_blank\">10.1038/ncomms4192</a></p> <p>Li, M., S. Jain, B.J. Baker, C. Taylor, and G.J. Dick (2014). Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep-sea hydrocarbon plume. Environmental Microbiology 16: 60-71. doi:<a href=\"http://dx.doi.org/10.1111/1462-2920.12182\" target=\"_blank\">10.1111/1462-2920.12182</a></p> <p>Sheik, C.S. 2, S. Jain, and G.J. Dick (2014). Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomics. Environmental Microbiology 16: 304-317. doi:<a href=\"http://dx.doi.org/10.1111/1462-2920.12165\" target=\"_blank\">10.1111/1462-2920.12165</a></p> <p>Baker, B.J., C.S. Sheik, C.A. Taylor, S. Jain, A. Bhasi, J.D. Cavalcoli, and G.J. Dick (2013). Community transcriptomic assembly reveals microbes that contribute to deep-sea carbon and nitrogen cycling. The ISME Journal 7: 1962-1973. doi:<a href=\"http://dx.doi.org/10.1038/ismej.2013.85\" target=\"_blank\">10.1038/ismej.2013.85</a></p> <p>Dick, G.J., K. Anantharaman, B.J. Baker, M. Li, D.C. Reed, and C.S. Sheik (2013). Hydrothermal vent plume microbiology: ecological and biogeographic linkages to seafloor and water column habitats. Frontiers in Microbiology 4: 124. doi:<a href=\"http://dx.doi.org/10.3389/fmicb.2013.00124\" target=\"_blank\">10.3389/fmicb.2013.00124 </a></p> <p>Anantharaman, K., J.A. Breier, C.S. Sheik, and G.J. Dick (2013). Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea bacteria. Proceedings of the National Academy of Sciences 110: 330-335. doi:<a href=\"http://dx.doi.org/10.1073/pnas.1215340110\" target=\"_blank\">10.1073/pnas.1215340110</a></p> <p>Baker, B.J., R.A. Lesniewski, and G.J. Dick. Genome-enabled transcriptomics reveals archaeal populations that drive nitrification in a deep-sea hydrothermal plume (2012). The ISME Journal 6: 2269-2279. doi:<a href=\"http://dx.doi.org/10.1038/ismej.2012.64\" target=\"_blank\">10.1038/ismej.2012.64</a></p> <p>Lesniewski, R.A., S. Jain, P.D. Schloss, K. Anantharaman,and G.J. Dick (2012). The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and chemolithotrophs. The ISME Journal 6: 2257-2268. doi:<a href=\"http://dx.doi.org/10.1038/ismej.2012.63\" target=\"_blank\">10.1038/ismej.2012.63</a></p>
<p>瓜伊马斯海盆热液羽流微生物样本的理化元数据（盐度（sal）、锰（Mn）、溶解氧（O₂）、温度（temp）等）</p> <p><em>本数据集关联以下出版物：</em><br />Anantharaman, K.A.、M.B. Duhaime、J.A. Breier、K. Wendt、B.M. Toner 与 G.J. Dick（2014）。多种深海病毒中的硫氧化基因。《科学》，344卷：757-760。doi:<a href="http://dx.doi.org/10.1126/science.1252229" target="_blank">10.1126/science.1252229</a></p> <p>Li, M.、B.M. Toner、B.J. Baker、J.A. Breier、C.S. Sheik 与 G.J. Dick（2014）。微生物摄铁：深海热液喷口铁扩散的机制。《自然-通讯》，5卷：3192。doi:<a href="http://dx.doi.org/10.1038/ncomms4192" target="_blank">10.1038/ncomms4192</a></p> <p>Li, M.、S. Jain、B.J. Baker、C. Taylor 与 G.J. Dick（2014）。天然深海烃类羽流宏转录组（metatranscriptome）中的新型烃单加氧酶基因。《环境微生物学》，16卷：60-71。doi:<a href="http://dx.doi.org/10.1111/1462-2920.12182" target="_blank">10.1111/1462-2920.12182</a></p> <p>Sheik, C.S.、S. Jain 与 G.J. Dick（2014）。通过宏基因组学（metagenomics）与宏转录组揭示神秘SAR324类群的代谢灵活性。《环境微生物学》，16卷：304-317。doi:<a href="http://dx.doi.org/10.1111/1462-2920.12165" target="_blank">10.1111/1462-2920.12165</a></p> <p>Baker, B.J.、C.S. Sheik、C.A. Taylor、S. Jain、A. Bhasi、J.D. Cavalcoli 与 G.J. Dick（2013）。群落转录组组装揭示参与深海碳氮循环的微生物。《ISME杂志》，7卷：1962-1973。doi:<a href="http://dx.doi.org/10.1038/ismej.2013.85" target="_blank">10.1038/ismej.2013.85</a></p> <p>Dick, G.J.、K. Anantharaman、B.J. Baker、M. Li、D.C. Reed 与 C.S. Sheik（2013）。热液喷口羽流微生物学：与海底及水体生境的生态与生物地理关联。《微生物学前沿》，4卷：124。doi:<a href="http://dx.doi.org/10.3389/fmicb.2013.00124" target="_blank">10.3389/fmicb.2013.00124</a></p> <p>Anantharaman, K.、J.A. Breier、C.S. Sheik 与 G.J. Dick（2013）。广泛分布的深海细菌中氢氧化作用与代谢可塑性的证据。《美国国家科学院院刊》，110卷：330-335。doi:<a href="http://dx.doi.org/10.1073/pnas.1215340110" target="_blank">10.1073/pnas.1215340110</a></p> <p>Baker, B.J.、R.A. Lesniewski 与 G.J. Dick。基于基因组的转录组学揭示驱动深海热液羽流硝化作用的古菌种群（2012）。《ISME杂志》，6卷：2269-2279。doi:<a href="http://dx.doi.org/10.1038/ismej.2012.64" target="_blank">10.1038/ismej.2012.64</a></p> <p>Lesniewski, R.A.、S. Jain、P.D. Schloss、K. Anantharaman 与 G.J. Dick（2012）。深海热液羽流宏转录组以水体甲烷氧化菌与化能自养菌为主。《ISME杂志》，6卷：2257-2268。doi:<a href="http://dx.doi.org/10.1038/ismej.2012.63" target="_blank">10.1038/ismej.2012.63</a></p>
