Additional file 11 of Analysis of long-range chromatin contacts, compartments and looping between mouse embryonic stem cells, lens epithelium and lens fibers
Additional file 8. overlap analysis of Hi-C replicate 1 and 2 chromatin loop anchors against expressed genes and ATAC-Seq consensus peaks. See Additional File 6 for details. Features overlapping with
Clustering of strong replicators associated with active promoter are sufficient to establish an early-replicating domain Repli-Seq: A Wt DT40 chicken cell line and one clonal homozygous cell line cont
The CFTR gene lies within an invariant topologically associated domain (TAD) demarcated by CTCF and cohesin, but shows cell-type specific control mechanisms utilizing different cis-regulatory elements
Despite a vast expansion in the availability of epigenomic data, our knowledge of the chromatin landscape at interspersed repeats remains highly limited by difficulties in mapping short-read sequencin