Genome-reduced bacteria exhibit pervasive episodes of adaptive stasis

Burkholderiaceae_sp4_models.zip : Compressed file containing the protein models used for the proteome functional redundancy analysis in a .pdb format for Burkholderiaceae species 4 as well as model ranking plot with pIDDT values used to evaluate the strength of the model. <br> Illumatobacteraceae_sp4_models.zip: Compressed file containing the protein models used for the proteome functional redundancy analysis in a .pdb format for Illumnatobacteraceae species 4 as well as model ranking plot with pIDDT values used to evaluate the strength of the model. <br> Phobius_domain_retriever_20220622.R: Rscript used to retrive the domains from the identified secretomes and cytoplasmatic proteomes.