Dataset 1 from: Proteins evolve on the edge of supramolecular self-assembly. Garcia-Seisdedos H, Empereur-Mot C, Elad N, Levy ED

This file is the supplementary Dataset 1 from: Proteins evolve on the edge of supramolecular self-assembly. Garcia-Seisdedos H, Empereur-Mot C, Elad N, Levy ED It contains computed values of nDp (normal distance to the closest bounding plane) for homo-oligomeric structures present in PDB. The tabulated file is organized as follows: - code: code of the 'Biological assembly', in the form of xxxx_1, xxx_2. The extensions _1/_2 means that there can be multiple possible assemblies proposed by PDB. - chain: chain identifier - aa: residue name - residue_number: residue number (renumbered from the SEQRES sequence) - No subunits: Number of subunits in the homo-oligomer - Symmetry: Internal symmetry of the homo-oligomer - X: x-coordinate of the residue - Y: y-coordinate of the residue - Z: z-coordinate of the residue - relative ASA: relative accessible surface area of the residue, calculated using AREAIMOL - stickiness: stickiness of the patch surrounding the residue, as defined in Levy et al. PNAS 2012. - d_plan: distance of the residue to the closest bounding plane. - d_plan_symAxis: type of symmetry axis which the bounding plane is associated to (180 = 2-fold; 120 = 3-fold; etc.) - d_plan_face : face-id of the homo-oligomer the axis is associated to - h_100_repre : indicates whether the homo-oligomer is part of a set non-redundant at 100% sequence identity - h_90_repre : indicates whether the homo-oligomer is part of a set non-redundant at 90% sequence identity - h_80_repre : indicates whether the homo-oligomer is part of a set non-redundant at 80% sequence identity