RANJAN_readme20230525.txt

This AUTHORLAST_readmeYYYYMMDD.txt file was generated on YYYYMMDD by [First and Last Name] <br> ------------------- GENERAL INFORMATION ------------------- <br> <br> 1. Title of Dataset <br> Prediction of Atypical Left atrial flutter <br> 2. Author Information <br> <br> Principal Investigator Contact Information Name: Ravi Ranjan Institution: University of Utah Address:95 S 2000 E, Salt Lake City, UT 84112-5000 Email:[e-mail] <br> <br> Associate or Co-investigator Contact Information Name: Matthias Lange Institution:University of Utah Address:95 S 2000 E, Salt Lake City, UT 84112-5000 Email: [e-mail] <br> <br> Alternate Contact Information Name: Institution: Address: Email: <br> <br> 3. Date of data collection (single date, range, approximate date) 2020 - 2022 <br> 4. Geographic location of data collection (where was data collected?): Salt Lake City Utah <br> 5. Information about funding sources that supported the collection of the data: <br> <br> This work was funded by the AHA through the Award 19IPLOI34760516 and the postdoctoral fellowship 903102 <br> <br> <br> -------------------------- SHARING/ACCESS INFORMATION -------------------------- <br> <br> 1. Licenses/restrictions placed on the data:CC BY – Allows others to use and share your data, even commercially, with attribution. <br> <br> 2. Links to publications that cite or use the data: https://www.frontiersin.org/articles/10.3389/fcvm.2022.893752/full <br> 3. Links to other publicly accessible locations of the data: https://toi.lib.utah.edu/resolve/10.7278/S50d-fdna-tekm <br> 4. Links/relationships to ancillary data sets: NA <br> 5. Was data derived from another source? NO <br> <br> 6. Recommended citation for the data: <br> <br> <br> <br> --------------------- DATA &amp; FILE OVERVIEW --------------------- <br> <br> 1. File List A. Filename: *readme* Short description: This file <br> <br> B. Folder: case* Short description: folder containing all files for one case. Files contained are the geometry (.vtk) and pacing site (*.vtx). See DATA-SPECIFIC INFORMATION for details <br> <br> <br> 2. Relationship between files: the vtx files assume mesh ordering as given in the vtk. <br> <br> <br> 3. Additional related data collected that was not included in the current data package: none <br> <br> <br> 4. Are there multiple versions of the dataset? yes/no No <br> <br> <br> <br> <br> <br> -------------------------- METHODOLOGICAL INFORMATION -------------------------- <br> <br> 1. Description of methods used for collection/generation of data: Standard clinical MRA and LGE-MRI where obtained. <br> <br> 2. Methods for processing the data: MRI was segmented and converted into a surface mesh. The surface mesh was converted into a volume mesh <br> <br> 3. Instrument- or software-specific information needed to interpret the data: Paraview, Meshalizer,OpenCARP <br> 4. Standards and calibration information, if appropriate: NA <br> 5. Environmental/experimental conditions: NA <br> 6. Describe any quality-assurance procedures performed on the data: Egde length of mesh where optimised to be between 600mu meter and 1200 mu meter <br> 7. People involved with sample collection, processing, analysis and/or submission: Ravi Ranjan T. Jared Bunch Matthias Lange Eugene Kwan Rob S. MacLeod Derek J. Dosdall <br> <br> <br> <br> <br> ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: .VTK ----------------------------------------- Mesh files used for the simulation in VTK format. The format is described at https://kitware.github.io/vtk-examples/site/VTKFileFormats/ <br> 1. Variable List A. Name: flags Description: 0: Healthy Tissue 1: Fibrotic tissue 2: Scar tissue <br> <br> <br> B. Name: fiber Description: myocardial fiber direction <br> ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: .vtx ----------------------------------------- Stimulation location files. The first line give the number of node points for stimulation. Secondline, opencarp specific. All following lines, are the node ids at which the current is injected. <br> <br> ----------------------------------------- DATA-SPECIFIC INFORMATION FOR: .xdmf .hd5 ----------------------------------------- Simulation results <br> 1. Variable List A. Name: phi Description: Transmembrane potential at given time point <br> <br>