遇见数据集

RawHash - d3_yeast_r94 (reads.fasta file)

收藏
Zenodo2023-01-29 更新2026-04-07 收录
数据链接:
官方服务:

资源简介:

Basecalled sequences as extracted from the FAST5 files following NCBI link: https://trace.ncbi.nlm.nih.gov/Traces/index.html?view=run_browser&amp;acc=SRR8648503&amp;display=metadata The reads are extracted using the "Fast5-to-Fastq" tool (https://github.com/rrwick/Fast5-to-Fastq) with the following command: <pre><code class="language-bash">Fast5-to-Fastq/fast5_to_fastq.py fast5_files/ | awk 'BEGIN{line = 0}{line++; if(line %4 == 1){print "&gt;"substr($1,2,36)}else if(line % 4 == 2){print $0}}' &gt; reads.fasta</code></pre>

提供机构:
Firtina
创建时间:
2023-01-29
二维码
社区交流群
二维码
科研交流群
商业服务