SweGen variants called using T2T-CHM13.
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The original VCF was generated using GATK haplotype caller's joint-germline mode.rsIDs were added using bcftools annotate and functional predictions using SnpEff and RefSeq 5.1 provided by the T2T-Consortium.All individual-level data were removed using bcftools view --drop-genotypes.This step removes all sample information and the FORMAT column.Only cohort-level statistics and information dependent on the allele and variant site, but not any single individual, remained.
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Zenodo创建时间：
2025-09-26
