Data from: A multigene molecular assessment of cryptic biodiversity in the iconic freshwater blackfishes (Teleostei: Percichthyidae: Gadopsis) of south-eastern Australia

Cytochrome b nexus file for Gadopsisgad.cytb.with.outs.final.nexS7 sequence nexus file for Gadopsis and outgroupsgads7.with.outs.nexCombined Cytochrome b and S7 sequence data in nexus formatThe codes for each OTU are in the readme file. The first number is the population, the second is the name of the population and the third is the specific individual. Note that the readme file contains the codes for samples that are not in the nexus file.gad_cytb.s7.concat.dryad.sub.nex*beast xml file for Gadopsis (S7 and cytb)The codes for each OTU are in the readme file. The first number is the population, the second is the name of the population and the third is the specific individual.gad.relax.long.xmlGARLI configuration file for best treeSettings used to generate the best ML tree in GARLI. This example is for cytb, but the settings were the same for each of the three datasets analysed except the number of attachments (which was twice the number of OTUs), outgroup and the model of sequence evolution.garli.nobs.confGARLI configuration file for bootstrappingSettings used to generate 250 ML bootstrap replicates in GARLI. This example is for cytb, but the settings were the same for each of the three datasets analysed except the number of attachments (which was twice the number of OTUs), outgroup and the model of sequence evolution.garli.bs.conf