Additional file 2 of Genome-wide identification and analysis of a cotton secretome reveals its role in resistance against Verticillium dahliae

Additional file 2: Table S1. List of the predicted secreted proteins in the cotton cultivar Zhongzhimian No.2 genome. Table S2. Statistical analysis of the orthologue relationship among the cultivar Zhongzhimian No.2 predicted secretome. Table S3. Statistics of the gene numbers of the predicted secretome and genome with functional annotation. Table S4. InterPro annotation of the predicted secretome of cotton cultivar Zhongzhimian No.2. Table S5. Gene function network annotation of secretome by KEGG database. Table S6. Information on the predicted secretome members in resistant and susceptible cultivars in response to Verticillium dahliae. Table S7. GO enrichment of the predicted secretome members in the cotton response to Verticillium dahliae. Table S8. Gene expression pattern of predicted secretome members indicates involvement of the phenylpropanoid biosynthesis pathway. Table S9. List of genes associated with extracellular stress that were only induced in the resistant but not the susceptible cotton cultivar during Verticillium dahliae infection. Table S10. Gene expression patterns of predicted secretome members that were co-expressed in the resistant or susceptible cultivars of cotton in response to Verticillium dahliae. Table S11. Statistic of members of orthologue associated with the 13 Verticillium wilt resistance candidate genes. Table S12. Orthologue analysis of 13 Verticillium wilt resistance candidate genes among other three cotton genomes. Table S13. Primer used in this study.