遇见数据集

Genome Assemblies For "Versatile Genome Assembly Evaluation With Quast-Lg"

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Zenodo2020-09-19 更新2026-05-28 收录
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资源简介:

<em>De novo</em> genome assemblies of Yeast_PB (<em>S. cerevisiae</em>, genome size: 12.1 Mb): Canu, FALCON, Flye, MaSuRCA (from Illumina pair-ends and PacBio SMRT) Yeast_NP (<em>S. cerevisiae</em>, genome size: 12.1 Mb): Canu, Flye, MaSuRCA (from Illumina pair-ends and Oxford Nanopores) Worm_PB (<em>C. elegans</em>,genome size: 100.3 Mb): Canu, FALCON, Flye, MaSuRCA (from Illumina pair-ends and PacBio SMRT) Fly_MP (<em>D. melanogaster</em>, genome size: 137.6 Mb): ABySS2, MaSuRCA, Meraculous, Platanus, SOAPdenovo2, SPAdes (from Illumina pair-ends and mate-pairs) Human_MP (<em>H. sapiens</em>, genome size: 3.1 Gb): UpperBound assembly only (from Illumina pair-ends and mate-pairs) Human_NP (<em>H. sapiens</em>, genome size: 3.1 Gb): UpperBound assembly only (from Illumina pair-ends and Oxford Nanopores) Each pack is accompanied with the upper bound assembly created with QUAST-LG (for computing theoretical limits on assembly correctness and completeness for a particular genome and set of reads). For more information and other human datasets assemblies please visit http://cab.spbu.ru/software/quast-lg/ or write to <em>quast.support@cab.spbu.ru.</em>

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Zenodo
创建时间:
2018-01-31
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