Novel transcriptomic microglia taxonomy across mouse and human pathologies

This archive contains the processed Seurat objects and associated R scripts used to generate all main and extended figures from the manuscript: Chhatbar et al. The data includes single-cell transcriptomic or spatial transcriptomics profiles of human brain immune cells, focusing on microglia across multiple brain regions and neurological conditions across two species, human and mouse. Each .rds file corresponds to a specific figure (or panel group), and accompanying R scripts reproduce the individual plots used to build the figures. Each figure's individual plots can be reproduced and saved using .R scripts. Final composite figures in the paper were assembled in Adobe Illustrator from these components.