Dataset for: Molecular simulations of green leaf volatiles and atmospheric oxidants on air/water interfaces

Dataset supporting the publication dx.doi.org/10.1039/C3CP44090G. Molecular simulations of green leaf volatiles and atmospheric oxidants on air/water interfaces. Representative GROMACS input files used in the simulations reported in this paper. Green leaf volatiles (GLVs) are oxygenated hydrocarbons that are emitted by plants, especially under stress conditions such as mechanical damage and local weather changes. GLVs can react with photochemically-generated oxidants (e.g., OH radicals) in atmospheric water drops, and contribute to the formation of secondary organic aerosols (SOAs). Here we investigated the adsorption of a gas phase GLV, 2-methyl-3-buten-2-ol (MBO) and OH radicals on atmospheric air/water interfaces using classical molecular dynamics (MD) simulations and potential of mean force (PMF) calculations. Our models can reproduce experimental values of the free energy of hydration of MBO and ˙OH, as well as 1-octanol/water partition coefficients of MBO determined experimentally in this study. Both MBO and ˙OH have a strong thermodynamic incentive to remain at the air/water interface, with their density profiles overlapping significantly at the interface. These results suggest that chemical reactions between MBO and ˙OH are more likely to take place at the interface, rather than inside the bulk of water droplets or in the vapor phase. We found a significant number of contacts between MBO and ˙OH in our simulations, which could lead to reactions between these two species.